Calculates reproduction indices from a mortAAR life table
Source:R/reproduction_indices.R
lt.reproduction.Rd
For population studies it is of vital importance to estimate growth or decline of a population. For archaeological datasets this is rarely attempted, probably because the data quality seems to scanty. Nevertheless, the calculation of such measures seems worth the try, at least it should give an impression if the resulting values are unrealistic high or low.
Usage
lt.reproduction(
life_table,
fertility_rate = "BA_log",
growth_rate = "fertility",
gen_len = 20
)
Arguments
- life_table
an object of class mortaar_life_table.
- fertility_rate
string or numeric. Either fertility rate according to McFadden & Oxenham 2018a if infants are represented well or Taylor et al. or fertility rate according to data by McFadden & Oxenham 2018a for P(5-19) index after Bocquet-Appel 2002. Options: 'McFO' (McFadden/Oxenham), 'TOMc' (Taylor et al.), 'BA_linear' (linear fit), 'BA_power' (power fit) or 'BA_log' (logistic fit). Default: BA_log'. Additionally, the user can specify an arbitrary number in lieu of the fertility rate.
- growth_rate
string or numeric. Either derived directly from the fertility calculations or from regression analysis by either McFadden & Oxenham 2018b (\(10.06 * D0--14/D) -- 1.61\)) or Bocquet-Appel and Masset (\((1.484 * (log10(200 * d5--14/d20 * d60/d20))**0.03 - 1.485)\)). Options: 'fertility', 'MBA', McFO'. Additionally, the user can specify an arbitrary number in lieu of the growth rate.
- gen_len
numeric. Length of generation for determining the rate of doubling the population. Default: 20.
Value
A data.frame with basic reproduction indices:
m: Mortality rate (= natality rate n).
\(0.127 * d5--14/d20 + 0.016\)
dep: Dependency ratio.
\(DR = (sum(D0--14) + sum(D60+)) / sum(D15--59) \)
TFR: Total fertility rate.
GRR: Gross reproduction rate.
\(GRR = TFR * 0.488\)
NRR: Net reproduction rate.
\(NRR = sum(GRR * age specific fertility * age specific survival / 10000)\)
r: Intrinsic growth rate in per cent per year.
Dt: Doubling time in years.
\(Dt = 100 * ln(2) / r\)
D30_D5: Ratio D30+/D5+ after Buikstra et al.
BR: Birth rate from ratio D30+/D5+.
\(BR = -11.493 * D30_D5 + 12.712\)
DR: Death rate from ratio D30+/D5+.
\(DR = -5.287 * D30_D5 + 6.179\)
Details
There are different approaches to calculate reproduction rates (e. g.
Henneberg 1978). We largely follow the methodology by
Hassan 1981. Typically, a Total fertility rate (TFR) of 6-8 is
assumed for prehistoric populations (Ascadi/Nemeskeri 1970;
Henneberg 1978; Hassan 1981). Recently, McFadden
and Oxenham 2018a have published a formula to estimate the Total
fertility rate from archaeological data, provided that infants are
represented fully in the archaeological record.
Unfortunately, this will not be the case for most archaeological
datasets. Therefore, we used the data published by McFadden and
Oxenham to apply it to the P(5-19)-index after Bocquet-Appel
2002. We approximated the ratio by three different methods of
fitting (linear, logistic, power) and recommend logistic fitting,
but the others are available as well.
We have also added the option to use the formula by Taylor et al.
2023 that uses the ratio of adults aged 15–49 in relation to those aged
15 or older.
The Gross reproduction rate (GRR) is calculated by multiplying the TFR
with the ratio of female newborns, assumed to be a constant of 48.8
of all children (Hassan 1981, 136). The Net reproduction rate is
arrived at by summing the product of the GRR, the age specific
fertility rate as defined by Hassan (1981, 137 tab. 8.7) and
the age specific survival taken from the life table and dividing the
result by 10000.
The Rate of natural increase or Intrinsic growth rate r (growth in per cent
per year) can be computed from the fertility following Hassan
(1981, 140). Alternative ways to calculate the intrinsic growth rate
derive from Bocquet-Appel and Masset (1977) and recently from
McFadden and Oxenham 2018b. The latter present a regression
analysis based on the index D0–15/D also used for fertility
calculations (see above) in connections with modern data.
Whatever is chosen as base for the growth rate calculations is used
for computing the doubling time in years, assuming exponential steady growth.
Also calculated is the mortality rate m after Bocquet-Appel and Masset
(1977) in per cent of a given population. Furthermore, the ratio of dependent individuals
is reported that is usually (but probably erroneously for archaic societies
(Grupe et al. 2015, 423) assumed to apply to those aged below 15 or
60 and above.
Finally, Buikstra et al. 1986 have made the interesting observation that
the relation of those individuals aged 30 years and above to those aged
5 years and above is very closely related to the birth rate and also closely
(but less significantly) related to the death rate. Therefore, these indices
are calculated as well.
References
acsadi_history_1970mortAAR
masset_bocquet_1977mortAAR
bocquet_appel_2002mortAAR
buikstra_et_al_1986mortAAR
grupe_et_al_2015mortAAR
hassan_1981mortAAR
henneberg_1976mortAAR
mcfadden_oxenham_2018amortAAR
mcfadden_oxenham_2018bmortAAR
taylor_et_al_2023mortAAR
Examples
schleswig <- life.table(schleswig_ma[c("a", "Dx")])
lt.reproduction(schleswig)
#> method value description
#> 1 m 4.39 Mortality
#> 2 dep 105.83 Dependency ratio
#> 3 TFR 7.01 Total fertility rate
#> 4 GRR 3.42 Gross reproduction rate
#> 5 NRR 1.69 Net reproduction rate
#> 6 r 2.63 Rate of natural increase
#> 7 Dt 26.39 Doubling time in years
#> 8 D30_D5 0.57 ratio D30+/D5+
#> 9 BR 6.20 Birth rate
#> 10 DR 3.18 Death rate
odagsen <- life.table(list(
"corpus mandibulae" = odagsen_cm[c("a", "Dx")],
"margo orbitalis" = odagsen_mo[c("a", "Dx")]
))
lt.reproduction(odagsen)
#> $`corpus mandibulae`
#> method value description
#> 1 m 3.37 Mortality
#> 2 dep 62.32 Dependency ratio
#> 3 TFR 6.46 Total fertility rate
#> 4 GRR 3.15 Gross reproduction rate
#> 5 NRR 1.82 Net reproduction rate
#> 6 r 2.98 Rate of natural increase
#> 7 Dt 23.24 Doubling time in years
#> 8 D30_D5 0.69 ratio D30+/D5+
#> 9 BR 4.74 Birth rate
#> 10 DR 2.51 Death rate
#>
#> $`margo orbitalis`
#> method value description
#> 1 m 2.42 Mortality
#> 2 dep 34.05 Dependency ratio
#> 3 TFR 5.83 Total fertility rate
#> 4 GRR 2.84 Gross reproduction rate
#> 5 NRR 1.45 Net reproduction rate
#> 6 r 1.87 Rate of natural increase
#> 7 Dt 37.09 Doubling time in years
#> 8 D30_D5 0.69 ratio D30+/D5+
#> 9 BR 4.77 Birth rate
#> 10 DR 2.52 Death rate
#>